Modifications to the extracellular polymeric substance, predominantly extracellular polysaccharide, of a biopolymer produced by rhizobium tropici ATCC 49672 yield a stable dry salt transported more easily than a fluid or gel and more stable than either. The salt may be re-constituted with water on-site. Embodiments may be employed as a soil amendment for soil strengthening, reducing hydraulic conductivity, erosion control and dust control as well as a metal chelator for contaminant remediation. Based on comparison with dextran standards, an embodiment demonstrated a molecular weight over 511,000 D. Embodiments include a day salt that is precipitated from solution and in use is re-hydrated back to original form. When added to a sandy soil at 0.1% by dry weight, an embodiment decreased the hydraulic conductivity by three orders of magnitude. These properties make embodiments of the present invention an attractive, “green” alternative to petroleum-based synthetic polymers for such applications as rapid roadway construction and soil erosion prevention.
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1. A dry salt comprising a biopolymer of at least an extracellular polymeric substance eps naturally produced by rhizobium tropici, said dry salt made by:
placing a culture of said rhizobium tropici in at least one container of water and nutrients;
maintaining said culture and said water-nutrient mixture for a pre-specified hold time to produce a first mixture comprising at least said water and said eps;
decanting said first mixture to yield said eps and an aqueous fluid;
precipitating said eps with an alcohol to yield a first precipitate;
adding to each said first precipitate at least one hydroxide to dissolve said first precipitate by mixing said hydroxide with said first precipitate to yield a homogeneous second mixture with a pH above about 10;
derivatizing said second mixture by adding at least one solid first salt, mixing said first salt with said second mixture to establish a homogeneous third mixture;
isolating said third mixture in an alcohol to yield a second precipitate;
decanting said alcohol, leaving at least said second precipitant;
rinsing said second precipitant at least once; and
drying said rinsed second precipitant to yield said dry salt.
10. A method of manufacturing a dry salt comprising a biopolymer of at least an extracellular polymeric substance eps naturally produced by rhizobium tropici, comprising:
placing a culture of said rhizobium tropici in at least one container of water and nutrients;
maintaining said culture and said water-nutrient mixture for a pre-specified hold time to produce a first mixture comprising at least water and said eps;
decanting said first mixture to yield said eps;
precipitating said eps with an alcohol to yield a first precipitate;
adding to each said first precipitate at least one hydroxide to dissolve said first precipitate by mixing said hydroxide with said first precipitate to yield a homogeneous second mixture with a pH above about 10;
derivatizing said second mixture by adding at least one solid first salt, mixing said first salt with said second mixture to establish a homogeneous third mixture;
isolating said third mixture in an alcohol to yield a second precipitate and an alcohol fluid;
decanting said alcohol, leaving at least said second precipitant;
rinsing said second precipitant at least once; and
drying said rinsed second precipitant to yield said dry salt.
21. A soil amendment, comprising:
a dry salt comprising a biopolymer of at least an extracellular polymeric substance eps naturally produced by rhizobium tropici, said dry salt made by:
placing a culture of said rhizobium tropici in at least one container of water and nutrients;
maintaining said culture and said water-nutrient mixture for a pre-specified hold time to produce a first mixture comprising at least water and said eps;
decanting said first mixture to yield said eps and an aqueous fluid;
precipitating said eps with an alcohol to yield a first precipitate;
adding to each said first precipitate at least one hydroxide to dissolve said first precipitate by mixing said hydroxide with said first precipitate to yield a homogeneous second mixture with a pH above about 10;
derivatizing said second mixture by adding at least one solid first salt, mixing said first salt with said second mixture to establish a homogeneous third mixture;
isolating said third mixture in an alcohol to yield a second precipitate;
decanting said alcohol, leaving at least said second precipitant;
rinsing said second precipitant at least once; and
drying said rinsed second precipitant to yield said dry salt; and
an aqueous solution to activate said dry salt.
22. A method for amending soil, comprising:
providing a dry salt comprising a biopolymer of at least an extracellular polymeric substance eps naturally produced by rhizobium tropici, said dry salt made by:
placing a culture of said rhizobium tropici in at least one container of water and nutrients;
maintaining said culture and said water-nutrient mixture for a pre-specified hold time to produce a first mixture comprising at least water and said eps;
decanting said first mixture to yield said eps and an aqueous fluid;
precipitating said eps with an alcohol to yield a first precipitate;
adding to each said first precipitate at least one hydroxide to dissolve said first precipitate by mixing said hydroxide with said first precipitate to yield a homogeneous second mixture with a pH above about 10;
derivatizing said second mixture by adding at least one solid first salt, mixing said first salt with said second mixture to establish a homogeneous third mixture;
isolating said third mixture in an alcohol to yield a second precipitate;
decanting said alcohol, leaving at least said second precipitant;
rinsing said second precipitant at least once; and
drying said rinsed second precipitant to yield said dry salt; and
mixing said dry salt with said soil to amend said soil.
3. The dry salt of
5. The dry salt of
6. The dry salt of
7. The dry salt of
said water is distilled deionized water;
said nutrients comprise at least:
yeast extract;
sodium carbonate;
soil extract; and
mannitol (C6H14O6); and
said first salt is added to provide a 0.1 normal sodium chloride solution.
11. The method of
12. The method of
14. The method of
15. The method of
16. The method of
said water as distilled deionized water;
said nutrients as at least:
yeast extract;
sodium carbonate;
soil extract; and
mannitol (C6H14O6); and
said first salt to yield a 0.1 normal sodium chloride solution.
17. The method of
18. The method of
20. The method of
24. The method of
25. The method of
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Under paragraph 1(a) of Executive Order 10096, the conditions under which this invention was made entitle the Government of the United States, as represented by the Secretary of the Army, to an undivided interest therein on any patent granted thereon by the United States. This and related patents are available for licensing to qualified licensees. Please contact Bea Shahin at 217 373-7234.
Both synthetic and biopolymers are made of repetitive monomeric units. The term primary structure is used to describe the chemical composition and the sequence of the repeated units. Many synthetic polymers prepared using petroleum based monomers have a simple, non-varied structure and are typically random copolymers where the repeat unit sequence is statistically controlled. In contrast, many biopolymers can fold into functionally compact shapes through crosslinking (via hydrogen bonding, hydrophobic associations, multivalent ion coordination, and the like). This changes not only their shape, but their chemical properties. In addition, biopolymers often have complex pendant moieties that display highly specific functionalities. The mono-dispersity and specific structure available in biopolymers provide distinct advantages over the poly-dispersity and random structure encountered in many synthetic polymers.
Rhizobium tropici ATCC® 49672 is a catalogued symbiotic nodulator of leguminous plants. Martinez-Romero et al., Rhizobium tropici, a Novel Species Nodulating Phaseolus vulgaris L. Beans and Leucaena sp. Trees, Int. J. Syst. Bacteriol. 41, 417-426, 1991. Rhizobium tropici is also known for its production of a gel-like, extracellular polymeric substance (EPS). Gil-Serrano, A. et al., Structure of the Extracellular Polysaccharide Secreted by Rhizobium leguminosarum var. phaseoli CIAT 899, Carbohydr. Res. 204, 103-107, 1990. Most of the Rhizobium-produced EPS are polysaccharides containing glucuronic acid. Dudman, W. F. et al., The Structure of the Acidic Polysaccharide Secreted by Rhizobium phaseoli Strain 127 K36, Carbohydr. Res. 117, 141-156, 1983a; Dudman, W. F., et al., The Structure of the Acidic Polysaccharide Secreted by Rhizobium phaseoli Strain 127 K87, Carbohydr. Res. 117, 169-183, 1983b; Franzén, L. E. et al., The Structure of the Acidic Polysaccharide Secreted by Rhizobium phaseoli Strain 127 K44, Carbohydr. Res. 117, 157-167, 1983. Some exceptions to this structure have been reported. Amemura, A. and T. Harada, Structural Studies on Extracellular Acidic Polysaccharides Secreted by Three Non-Nodulating Rhizobia, Carbohydr. Res. 112, 85-93, 1983; Gil-Serrano et al. (1990). Studies of the structure of these polymers have been reviewed by Laspidou and Rittmann. Laspidou, C. S. and B. E. Rittmann, A Unified Theory for Extracellular Polymeric Substances, Soluble Microbial Products, and Active and Inert Biomass, Wat. Res. 36, 2711-2720, 2002. The functions of the EPS include surface adhesion, self-adhesion of cells into biofilms, formation of protective barriers, water retention around roots, and nutrient accumulation. Laspidou and Rittmann (2002).
Refer to
EPS from Rhizobium tropici has unique adhesive and protective biofilm formation qualities. Given that production and transportability issues are addressed, the adhesion and water retention characteristics of ex situ “grown” EPS may be useful for dust and erosion control in situations where traditional techniques are not viable. Commercially, there are numerous products available that are employed for both dust control and soil strengthening. Nontraditional soil strengthening amendments have been investigated for many years and include ionic, enzymatic, lignosulfonate, salt, polymer and tree resin stabilizers and petroleum resins. Tingle, J. S. et al., Constitutive Analyses of Nontraditional Stabilization Additives, ERDC TR-04-5, U.S. Army Corps of Engineers, Engineer Research and Development Center, Vicksburg, Mass., 2004. These non-traditional amendments act by coating the soil particles and forming strong physical bonds with the soil. Newman, K. et al., Stabilization of Silty Sand Using Polymer Emulsions, IJP 4, 1-12, 2005. Unlike EPS biopolymers, these static molecules do not have the capacity for secondary reactions, such as crosslinking or ion exchange, which may be a key factor in strengthening the bonds between the biopolymer and the soil and have been found to be less effective when compared to petrochemical soil stabilizers. Synthetic, petroleum-based soil additives, packaged as emulsions, are gaining popularity due to their ease of handling and lower safety and environmental concerns compared to traditional soil stabilization agents such as asphalt, Portland cement, and lime. The majority of soil-stabilizing emulsions are copolymers of ethylene or vinyl acetate or are acrylic copolymers. National Resource Conservation Service, Conservation Practice Standard Anionic Polyacrylamide (PAM) Erosion Control, Code 450. These petroleum-based additives produce amended soils with improved engineering properties. Soil-stabilizing polymers, when mixed with soils, may exhibit strengths similar to that of Portland cement but impart more flexibility to the soil, i.e. increase toughness. This translates into increased resistance to cracking due to a higher ultimate failure strain before yield. Newman et al. (2005).
EPS are being investigated for use in a wide range of commercial, medical, and industrial applications. Specific applications include adsorption of heavy metals from wastewater and natural water (Comte et al., Biosorption Properties of Extracellular Polymeric Substances (EPS) Towards Cd, Cu, and Pb for Different pH Values, Jour. of Haz, Matls. 151, 185-193, 2008; Noghabi et al., The Production of a Cold-Induced Extracellular Biopolymer by Pseudomonas Fluroscens BM07 under Various Growth Conditions and its Role in Heavy Metals Absorption, Process Biochem. 42, 847-855, 2007), bioremediation of polycylic aromatic hydrocarbons in oil-contaminated beach sand (Xu et al., Use of Slow Release Fertilizer and Biopolymers for Stimulating Hydrocarbon Biodegradation in Oil-Contaminated Beach Sediments, Marine Pollution Bull. 51, 1101-1110, 2005), and treatment of activated sludge (Sheng et al., Characterization of Adsorption Properties of Extracellular Polymeric Substances (EPS) Extracted from Sludge, Colloids and Surfaces B: Biointerfaces 62, 83-90, 2008), Yu et al., Extracellular Proteins, Polysaccharides and Enzymes Impact on Sludge Aerobic Digestion after Ultrasonic Pretreatment, Water Rsch. Vol. 42 (8-9), 1924-1934, 2008).
Current materials utilized for soil stabilization and dust control are synthetic petroleum-based materials. Many of these synthetic materials are non-biodegradable and persist long after their useful life as amendments. Thus, for one application, what is needed is an environmentally benign and biodegradable replacement for petroleum-based amendments that provides increased soil strength when mixed with soil for load-bearing applications such as walkways, paths, roads, airfields and the like. For yet another application what is needed is a similar benign and biodegradable amendment to limit dust formation by agglomerating soil particles together, preventing fine particle formation which may become airborne. For yet another application what is needed is a similar benign and biodegradable amendment that may be employed for contaminant remediation. Select embodiments of the present invention address these needs.
In select embodiments of the present invention, a bacteria, Rhizobium tropici, produces a biopolymer ex situ that, when recovered from a bacterial culture and added to a soil, improves the engineering properties. Preliminary studies have demonstrated that significant strength gains, similar to those observed with synthetic polymers, can be realized by adding Rhizobium tropici EPS to silty sand soils. The use of biopolymers in engineering applications also reduces or eliminates the use or generation of hazardous substances in the design, manufacture, and use of the petroleum-based polymers currently in use as well as the use of petroleum in general. In general, biopolymers may also be modified to optimize the desired attributes for a particular use, thus they are application specific. For example, select embodiments of the present invention may be engineered to perform a specific task, such as metal chelation while simultaneously functioning as a soil binder to prevent transport of heavy metals with suspended solids. With the addition of specific functional groups to the EPS it becomes a heavy metal chelator as well as erosion/dust control agent. Modifications made to Rhizobium tropici EPS allow production of a transportable product that can be reconstituted with water at the location of use. This eliminates issues associated with competitive biological systems under in situ EPS production, and presents a logistic advantage over transport of liquid soil amendments such as the petroleum based polymeric amendments. In a specific application such as traditional small arms firing range (SAFR) maintenance, the addition of a non-polluting soil amendment with a smaller production carbon footprint may significantly reduce support costs for live fire (munitions) training.
Further, select embodiments of the present invention are inherently self-healing, thus providing a long term solution in such applications as berms for SAFR, Open Burning/Open Detonation (OB/OD) ranges, levees, road embankments, and the like. This results in reduced life cycle costs through reduced maintenance costs, decreased soil loss, and reduction in transport of environmental contaminants, in particular heavy metals, among other benefits. Finally, at the end of their useful life (if applicable) biopolymers may be treated (if necessary) to promote natural decomposition, consumed as food by soil bacteria.
Uses of select embodiments of the present invention include improving the strength of soil for load-bearing applications such as road bases, parking areas, construction platforms, helipads, and the like. Not only are strength gains to the unmodified soil realized, but the strain at which failure occurs is higher, indicating that the biopolymer provides increased flexibility (or toughness) to the soil. Improved engineering characteristics upgrade the load bearing and fracture resistance properties of native soils. For example, when added to soil at 0.1% by dry weight, the extracellular polysaccharide (EPS) produced by Rhizobium tropici ATCC® 49672 in select embodiments of the present invention decreases the hydraulic conductivity of the soil by three orders of magnitude.
In select embodiments of the present invention, modifications made to the EPS produced by Rhizobium tropici ATCC® 49672 produce a dry salt that precipitates from solution and can be re-hydrated back to its original form. This is particularly useful in situations where traditional techniques are not viable. This biopolymer may replace petroleum-based polymers currently used for the above applications. Unlike synthetic polymers based on monomeric components that either react immediately or wash away with added moisture, an EPS biopolymer salt adjusts to the buffering pH of a soil. One result is a soil amendment that remains in place and creates additional covalent linkages as the soil is disturbed, e.g., agitated, undergoes wet/dry cycles, and the like. Further; addition of small quantities of biopolymer may result in amide-forming condensation reactions that increase soil strength to levels equal to or beyond that achieved from the original application of the amendment.
In select embodiments of the present invention, a dry salt comprising a biopolymer of at least an extracellular polymeric substance (EPS) naturally produced by Rhizobium tropici is made by: placing a culture of Rhizobium tropici in a container of water/nutrients; maintaining the culture and water/nutrients for a pre-specified hold time to produce a first mixture of water/nutrients and EPS; decanting the first mixture to yield EPS and an aqueous fluid; precipitating the EPS with an alcohol to yield a first precipitate; adding to the first precipitate an hydroxide to dissolve the first precipitate by mixing the hydroxide with the first precipitate to yield a homogeneous second mixture with a pH above about 10; derivatizing the second mixture by adding a solid salt, mixing the salt with the second mixture to establish a homogeneous third mixture; isolating the third mixture in an alcohol to yield a second precipitate; decanting the alcohol, leaving the second precipitant; rinsing the second precipitant; and drying the rinsed second precipitant to yield the dry salt.
In select embodiments of the present invention, the container is one or more bioreactors.
In select embodiments of the present invention the Rhizobium tropici is Rhizobium tropici ATCC® 49672, the solid salt is NaCl and the alcohol is ethanol added in the volume ratio of 1:2 ethanol to the mixture.
In select embodiments of the present invention, the hydroxide is added in a quantity to yield a pH above about 10.
In select embodiments of the present invention the water is distilled deionized water and said first salt is added to provide a 0.1 normal sodium chloride solution.
In select embodiments of the present invention the EPS comprises one or more extracellular polysaccharides.
In select embodiments of the present invention the pre-specified hold time is about one hour.
In select embodiments of the present invention, a method of manufacturing a dry salt comprising a biopolymer of at least an extracellular polymeric substance (EPS) naturally produced by Rhizobium tropici, comprises: placing a culture of said Rhizobium tropici in one or more containers of water/nutrients; maintaining the culture and water/nutrients for a specified hold time to produce a first mixture comprising water/nutrients and EPS; decanting the first mixture to yield EPS; precipitating the EPS with an alcohol to yield a first precipitate; adding to the first precipitate one or more hydroxides to dissolve the first precipitate by mixing the hydroxide with the first precipitate to yield a homogeneous second mixture with a pH above about 10; derivatizing the second mixture by adding one or more solid salts, mixing the added solid salt with the second mixture to establish a homogeneous third mixture; isolating the third mixture in an alcohol to yield a second precipitate and an alcohol fluid; decanting the alcohol, leaving a second precipitant; rinsing the second precipitant one or more times; and drying the rinsed second precipitant to yield the dry salt.
In select embodiments of the present invention, the method employs a bioreactor as the container.
In select embodiments of the present invention the method employs Rhizobium tropici ATCC® 49672 as a culture, NaCl as a solid salt, and ethanol as an alcohol added in the volume ratio of approximately 1:2 ethanol to the mixture of the water/nutrients and the EPS.
In select embodiments of the present invention, the method adds sufficient hydroxide to yield a pH above about 10 for the second mixture.
In select embodiments of the present invention, the method employs distilled deionized water adding said first salt to provide a 0.1 normal sodium chloride solution.
In select embodiments of the present invention the method comprises re-cycling the aqueous fluid to the container for use in subsequent batch processing and distilling and re-cycling the alcohol fluid for re-use in precipitating the EPS in subsequent batch processing.
In select embodiments of the present invention the method yields an EPS comprising one or more extracellular polysaccharides.
In select embodiments of the present invention the method employs a pre-specified hold time of about one hour.
In select embodiments of the present invention, a soil amendment comprises: a dry salt comprising a biopolymer of an extracellular polymeric substance (EPS) naturally produced by Rhizobium tropici, the dry salt made by: placing a culture of Rhizobium tropici in one or more containers of water/nutrients; maintaining the culture and water/nutrients for a pre-specified hold time to produce a first mixture comprising water/nutrients and EPS; decanting the first mixture to yield EPS and an aqueous fluid; precipitating the EPS with an alcohol to yield a first precipitate; adding to each first precipitate one or more hydroxides to dissolve the first precipitate by mixing the hydroxide with the first precipitate to yield a homogeneous second mixture with a pH above about 10; derivatizing the second mixture by adding one or more solid salts, mixing the salt with the second mixture to establish a homogeneous third mixture; isolating the third mixture in an alcohol to yield, a second precipitate; decanting the alcohol, leaving the second precipitant; rinsing the second precipitant one or more times; and drying the rinsed second precipitant to yield the dry salt; and an aqueous solution to activate the dry salt.
In select embodiments of the present invention, a method for amending soil comprises: providing a dry salt comprising an extracellular polymeric substance (EPS) naturally produced by Rhizobium tropici, the dry salt made by: placing a culture of Rhizobium tropici in one or more containers of water/nutrients; maintaining the culture and water/nutrients for a pre-specified hold time to produce a first mixture comprising water/nutrients and EPS; decanting the first mixture to yield EPS and an aqueous fluid; precipitating the EPS with an alcohol to yield a first precipitate; adding to each first precipitate one or more hydroxides to dissolve the first precipitate by mixing the hydroxide with the first precipitate to yield a homogeneous second mixture with a pH above about 10; derivatizing the second mixture by adding one or more solid salts, mixing the added solid salt with the second mixture to establish a homogeneous third mixture; isolating the third mixture in an alcohol to yield a second precipitate; decanting the alcohol, leaving the second precipitant; rinsing the second precipitant one or more times; and drying the rinsed second precipitant to yield the dry salt; and mixing the dry salt with soil to amend the soil.
In select embodiments of the present invention, the method further comprises adding an aqueous solution to activate the dry salt. In select embodiments of the present invention, the method further comprises adding the aqueous solution to the dry salt prior to mixing the dry salt with the soil. In select embodiments of the present invention, the method further comprises mixing the dry salt with the soil at a weight ratio of about 1:1000 of dry salt to soil.
In select embodiments of the present invention, biopolymer materials were dissolved in water solutions with elevated pH, filtered, and the resultant water/biopolymer solution used to produce salts of the biopolymer. See
Refer to
It is noteworthy that, from a practical standpoint, the Rhizobium tropici EPS displays interesting solution behavior. Refer to
In select embodiments of the present invention, Rhizobium tropici is interacted with a hydroxide (OH−) to precipitate a biopolymer. NaCl is then added to prepare for a precipitation in ethanol. The resultant precipitant is then washed and dried to yield a water-soluble salt.
Modifications made to the EPS produced by Rhizobium tropici allow high yield production of a modified EPS in a bioreactor containing a monoculture of Rhizobium tropici. Use of multiple bioreactors in a modular system that is able to be both scaled to a specific user and easily transported will enable production and employment of the amendment on or near location of its employment. The modified EPS may be processed to produce a transportable dry concentrate that may be reconstituted prior to use. One advantage of ex situ production is elimination of competitive biological systems present in situ.
In a specific test, Rhizobium tropici ATCC® 49672 procured from the American Type Culture Collection, Manassas, Va., was rehydrated into a specified growth medium (#111 broth) with a pH of 7.2. The optimal growth conditions for biopolymer production were based on the incubation medium recommended by the ATCC in 2007. The medium contains yeast extract, a soil extract, and mannitol (C6H14O6) as a carbon source. The initial soil extract was prepared from African violet potting soil according to instructions supplied by ATCC®. The completed solution was autoclaved before use. Cultures were incubated aerobically at 30° C. The composition of the growth medium (#111 broth) is shown in Table 1.
TABLE 1
Composition of the AVS #111 broth.
Ingredient
Amount
Composition
Yeast
20
g
Extract
Mannitol
200
g
Sodium
4
g
carbonate
DDI water
16
L
Soil extract
4
L
Total nitrogen (N) - 0.12%:
Ammoniacal
N - 0.05%
Nitrate N - 0.03%
Urea N - 0.04%
Phosphate - 0.09%
Soluble potash - 0.07%
Refer to
Characterization of the EPS was done first by size exclusion chromatography. Samples were loaded onto a 1.5×30-cm size exclusion column and eluted at 0.5-mL/min in 10-mM ammonium acetate at a pH of 5.5. Detection was accomplished by means of a Knauer refractive index detector. Retention times were compared to dextran standards of 10-kD, 167-kD, and 511-kD molecular weight. Next, the EPS was characterized by glycosyl composition analysis performed by combined gas chromatography/mass spectrometry (GC/MS) of the per-O-trimethylsilyl (TMS) derivatives of the monosaccharide methyl glycosides produced from the sample by acidic methanolysis using procedures described in Merkle and Poppe. Merkle, R. K. and I. Poppe, Carbohydrate Composition Analysis of Glycoconjugates by Gas-Liquid Chromatography/Mass Spectrometry, Methods Enzymol. 230, 1-15, 1994. GC/MS analysis of the TMS methyl glycosides was performed on an HP 5890 GC interfaced to a 5970 MSD, using an Alltech EC-1 fused silica capillary column (30-m×0.25-mm ID). The EPS was also characterized by glycosyl linkage analysis in which the sample was permethylated, depolymerized, reduced, and acetylated. The resulting partially methylated alditol acetates (PMAAs) were analyzed by GC/MS as described by York et al. York, W. S., et al., Isolation and Characterization of Plant Cell Walls and Cell Wall Components, Methods Enzymol., 118, 3-40, 1985. The EPS was also characterized by NMR spectroscopy. The sample was deuterium-exchanged by lyophilization from D2O (99.9% D), dissolved in 0.7-mL D2O (99.96% D), and transferred to a 5 mm NMR tube (Wilmad). 1-D Proton and 2-D TOCSY, NOESY, gradient enhanced COSY (gCOSY), gradient enhanced HSQC (gHSQC), and gradient enhanced HSQC-TOCSY (gHSQC-TOCSY) NMR spectra were acquired on a Vaarian Inova-500 MHz spectrometer at 343 K (70° C.). Chemical shifts were measured relative to internal acetone (δH=2.225 ppm, δC=31.07 ppm). Finally, surface tension was determined as a characteristic of the EPS. The height of a column of aqueous solution drawn into a capillary tube is proportional to the surface tension of the solution. The surface tension of the Rhizobium tropici EPS salt solution was compared to that of DDI water and another bacterium. See
Potential use as a soil amendment required testing for hydraulic conductivity. EPS salt was added to clean sand at 0.33% by dry weight. Hydraulic conductivity was determined using the constant head permeability test with test parameters as given in Table 2. The constant-head method allows water to move through the soil under a steady-state head condition while the quantity of water flowing through the soil is measured over a period of time. Hydraulic conductivity was compared using three column lengths, 55 cm, 60 cm, and 65 cm.
TABLE 2
Test parameters.
Test Parameters
Value
K (cm/sec) = Q * L/a * h * T
Length of Specimen, L (cm)
2.500
Diameter of Specimen, D (cm)
1.200
Area of Specimen, a (cm2)
2.826
Head height, h(cm)
50
cm
60
cm
65
cm
Dry weight of specimen, W2-W1 (g)
5.000
Specific gravity (Gs)
2.660
Chemical characterization of Rhizobium tropici EPS. Based on the dextran standards, the Rhizobium tropici EPS demonstrated a molecular weight over 511,000 D. The results of the glycosyl composition analysis are given in Table 3. The monosaccharides are identified by their retention times in comparison to standards and the carbohydrate character of these are authenticated by their mass spectra. The EPS is composed mostly of glucose with some galactose. Linkage analysis of this sample, like the composition analysis, suggests that the Rhizobium tropici EPS is quite complex. Most of the linkages observed are consistent with those of the EPS produced by Sinorhizobium meliloti. Skorupska, A. et al., Rhizobial Exopolysaccharides Genetic Control and Symbiotic Functions, Microbial Cell Factories 5, 7, 19 pp, 2006. However, major peaks are unaccounted for in this structure, such as the terminal galactopyranose, 3,4-linked glucopyranose and the 3,4,6-linked glucopyranose. The 3,4,6-linked glucopyranose was observed by NMR to be the site of attachment of both pyruvate and a glucose residue not seen in S. meliloti. By NMR, the structure of this extracellular polysaccharide also appears to be similar to the succinoglycan from R. meliloti described by Chouly, C. et al (1995). Chouly, C. et al., NMR Studies of Succinoglycan Repeating-Unit Octasaccharides from Rhizobium meliloti and Agrobacterium radiobacter, Int. J. Biol. Macromol. 17, 357-363, 1995. However, a few differences were observed in the NMR analysis from the published structure.
The EPS produced by Rhizobium tropici grown in a lab displayed the same basic repeating structure of other Rhizobial EPS. Research has established that EPS from different strains of the same species often have variations in EPS structure although the basic repeating unit is the same. Canter Cremers et al., Unusual Structure of the Exopolysaccharide of Rhizobium leguminosarum bv. viciae Strain 248, Carbohydr. Res. 218, 185-200, 1991; Amemura and Hardata (1983); Dudman et al., (1983a, 1983b); Franzen et al. (1983).
TABLE 3
Rhizobium tropici EPS glycosyl linkage analysis
Percentage
Glycosyl Residue
Area
Present
Terminal galactopyranose
17630582
1.7
3 linked glucopyranose
117060862
11.6
3 linked galactopyranose
57791861
5.7
6 linked glucopyranose
36719123
3.6
4 linked glucopyranose
118023243
11.7
3,4 linked galactopyranose
27275239
2.7
2,3 linked galactopyranose
22033572
2.2
3,4 linked glucopyranose
75103353
7.4
2,4 linked galactopyranose
32306217
3.2
3,6 linked glucopyranose
91017884
9.0
4,6 linked glucopyranose
174923085
17.3
4,6 linked galactopyranose
24430079
2.4
3,4,6 linked glucopyranose
105586225
10.5
2,4,6 linked glucopyranose
51368581
5.1
2,3,6 linked galactopyranose
18238690
1.8
2,3,6 linked glucopyranose
15682677
1.6
2,3,4,6 linked glucopyranose
23074469
2.3
Sum
100
The production of the biopolymer in bioreactors with monoculture is attractive because of the high yield of polymer that can be obtained in the absence of competitive and predatory actions of other bacterial species in situ. Initial efforts to produce a biopolymer resulted in solid materials that did not have the hydroscopic, gel forming, and swelling nature noted for the EPS biopolymer prior to water removal. Polymer cross-linking as a result of condensation reactions between carboxylic acid and amine functionalities may produce much larger polymers with lower hydrophilicity upon water removal. McMurray, J., Organic Chemistry, Third Edition, Brooks/Cole Publishing Company, Pacific Grove, Calif., pp. 1049-1050, 1992.
In order to reduce or eliminate these reactions, derivatization of the majority of the carboxylic acid functional groups along the EPS biopolymer was achieved by elevating the solution pH and then adding NaCl. Under these conditions, it is surmised that deprotonation of the carboxylic acid groups and ion pairing, prior to precipitation using ethanol, results in a biopolymer salt. In such a form, the reaction between amines and carboxylic acid groups to produce cross linkages is thought to be reduced. When reconstituted in water, the dried salt produced in this manner quickly forms gels similar to those formed by the EPS biopolymer prior to drying. This technique provides a means of producing a low weight solid material that can easily be transported for onsite use employing local water sources for its reconstitution. Upon reintroduction to the soil, the sodium salt will be available for proton or other cation-exchange, fixating the biopolymer within the soil.
One useful property of the Rhizobium tropici EPS salt is its unique surface tension. Refer to
Select embodiments of the present invention were tested for use as a soil amendment. The results of the hydraulic conductivity testing are shown in
TABLE 4
Calculation of hydraulic conductivity by the constant-head method
Q
t
A * h * t ×
k × 10−5
Average ×
SD ×
Condition
Sample
(cm3)
(sec)
Q * L
105
(cm/s)
10−5
10−5
Sand
1
83.27
600
208.18
1.10
189
162
23.4
h = 65 cm
2
64.85
600
162.13
1.10
147
3
66.10
600
165.25
1.10
150
0.1% BP in sand,
1
11.08
86400
27.70
159
0.175
0.188
0.0135
h = 65 cm
2
12.83
86400
32.08
159
0.202
3
11.96
86400
29.89
159
0.188
Sand,
1
48.04
600
120.10
1.02
1183
114
15
h = 60 cm
2
51.35
600
128.38
1.02
126
3
39.48
600
98.70
1.02
97.0
0.1% BP in sand,
1
3.97
88800
9.93
151
0.0659
0.0413
0.0286
h = 60 cm
2
5.67
173400
14.18
294
0.0482
3
0.54
80400
1.35
136
0.00988
Sand,
1
25.67
600
64.18
0.933
68.8
91.2
37.1
h = 55 cm
2
49.98
600
124.95
0.933
134
3
26.41
600
66.03
0.933
70.8
0.1% BP in sand,
1
9.28
85200
23.20
132
0.175
0.0874
0.0782
h = 55 cm
2
3.31
84900
8.28
132
0.0627
3
0.22
14400
0.55
22.4
0.0246
where:
Table 5 examines the relationship between hydraulic conductivity and the potential for erosion (erodibility). The experimentally-derived hydraulic conductivity values for the control sand and the EPS-amended sand place them in appropriate classes for sands and clays. Stone, R. P., Vegetated Filter Strip System Design Manual, Ontario Ministry of Agriculture, Food and Rural Affairs, 2008; United States Department of Agriculture, Natural Resources Conservation Service, Soil Survey Manual, Chapter 3, Examination and Description of Soils, 2008. This is supported by the work of Zeleke and Si who reported that, on the observation (small) scale, variability in soil hydraulic conductivity (K) is significantly related to both sand and silt content. Zeleke, T. B. and B. C. Si, Scaling Relationships Between Saturated Hydraulic Conductivity and Soil Physical Properties, SSSAJ 69, 1691-1702, 2005. On a larger scale, the hydraulic conductivity is related to clay and organic carbon content. However, these scales are interdependent. The hydraulic conductivity of the amended sand was actually lower than the range given for clays. Evaluating the hydraulic conductivity value and the soil class indicates that the soil erosion potential is higher for the amended sand. However, this does not take into account the high viscosity and adhesive characteristics of the EPS.
The erosion factors shown in Table 5 as the K factor (Kw and Kf) and the T factor are indicators of the potential for water erosion. The K Factor is used in the Universal Soil Loss Equation (USLE) and the Revised Universal Soil Loss Equation (RUSLE) to predict the average annual rate of soil loss by water erosion in tons per acre per year. The estimates are based primarily on percentage of silt, sand, and organic matter on soil structure and permeability. In general, the higher the value, the more susceptible the soil is to erosion by water. Kw indicates the erodibility of the whole soil and Kf indicates the erodibility of the fines fraction, i.e., material less than 2 mm. Note that polyacrylamide, a common soil amendment used for erosion control, also may reduce permeability in some soils but is highly effective as a rainfall erosion control agent. NRCS Code 450; Ajwa, H. A. and T. J. Trout, Polyacrylamide and Water Quality Effects on Infiltration in Sandy Loam Soils, Soil Sci. Soc. Am. J. 70, 643-650, 2006.
Wind erodibility groups are made up of soils that have similar properties affecting their susceptibility to wind erosion in cultivated areas. University of Delaware, College of Agriculture and Natural Resources, Spatial Analysis Lab, accessed January, 2008. Susceptibility to wind erosion ranges from the most susceptible, Group 1, to least susceptible, Group 8. Group 1 consists of coarse sands, sands, fine sands, and very fine sands. Group 5 consists of non-calcareous loams and silt loams that are less than 20% clay and sandy clay loams, and sandy clays. Group 8 consists of rocky or wet soils that are not subject to wind erosion. As seen with the other erosion factors, the K value of the amended soil was so low that it actually counted as a sub-surface soil, and the erosion index is not representative.
TABLE 5
Effect of amendment of soil on erosion
Surface
water
runoff
Soil
Wind
Wind
potential
texture
Erosion factor
erodibility
erodibility
Soil
HC class
Viscosity
1-5% slope
class
Kw
Kf
T
group
index
Control sand
Moderate
Low
Moderate
Loamy
0.05
nd
5
1
310
sand
Biopolymer
Very low
Very
Very high
Clay
0.37
0.37
4
5
56
amended
high
sand
On-site use of select embodiments of the present invention to stabilize soils and chelate heavy metals achieves appreciable cost savings. The use of traditional additives, e.g., lime, portland cement, petroleum based polymers and the like, costs from $0.25 to $1.05 per pound of product used, The total cost can vary dramatically depending on the soil conditions, the loading of stabilizer required, and application methods used. The cost of traditional petroleum-based additives continues to increase with the cost of petroleum. Select embodiments of the present invention demonstrate a reduction in lifecycle cost over both traditional and conventional non-traditional treatments due to several factors. These include: the ready “producibility” of a biopolymer; an inexpensive “green” production process train that results in minimal waste; transportation of a lighter, stable, dry material; inherent water retention properties and the transportability of “portable” bioreactors to produce product on-site. Further, because synthetic polymers persist in the soil, treatment of berms, levees, embankments, impact areas and the like may require expensive treatment for reuse, whereas with biopolymers, reapplication of biopolymer or reuse of treated soil does not pose any environmental or performance issues.
Cost-effective dust and erosion control on bermed and unbermed SAFRs and OB/OD ranges may be obtained with select embodiments of the present invention. Range operators spend significant amounts of time re-surfacing berms as a result of rutting and washout of impact areas following a heavy rain. The conventional approach to erosion control on steep banks is vegetation and reinforcement. Vegetation is difficult to maintain as projectile impacts often prevent the sustainment of a vegetative stand near target areas. Reinforcement with incompressible materials such as riprap, conventional portland cement-based concrete or stone presents a ricochet hazard. Select embodiments of the present invention provide a soil stabilization approach to SAFR management as bullet impacts will ultimately damage any solid material. An additional application of select embodiments of the present invention plus water, as needed, or water alone, promotes stabilizing cross linkages, initiating a self-healing process. Select embodiments of the present invention are easily applied by range operators as a dry powder or gelled polymer water mixture.
In summary, the biopolymer produced by Rhizobium tropici may be cultivated in batch bioreactors and modified to yield a readily transportable salt that precipitates from solution and can be re-hydrated back to its original form. A 0.33% solution of the salt reduces surface tension more than three times relative to water. When an EPS salt represented by select embodiments of the present invention is added to soil at 0.1% by dry weight, this amendment significantly decreases the hydraulic conductivity of the soil. The values are similar to that produced by amending with synthetic polymers, but the Rhizobium tropici polymer is biodegradable and production does not produce non-biodegradable waste. These properties make the biopolymer an attractive, “green” alternative to synthetics for use in construction, in particular for addressing soil erosion and stability requirements.
O'Connell, Kevin P., Martin, William A., Larson, Steven L., Ringelberg, David B., Newman, John K., Medina, Victor F.
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| Oct 01 2008 | O CONNELL, KEVIN P | HUMPHREYS ENGINEER CENTER SUPPORT ACTIVITY | ASSIGNMENT OF ASSIGNORS INTEREST SEE DOCUMENT FOR DETAILS | 021752 | /0738 | |
| Oct 02 2008 | RINGELBERG, DAVID B | HUMPHREYS ENGINEER CENTER SUPPORT ACTIVITY | ASSIGNMENT OF ASSIGNORS INTEREST SEE DOCUMENT FOR DETAILS | 021752 | /0738 | |
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